STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25739.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)    
Predicted Functional Partners:
AJR25740.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
AJR25738.1
Elongation factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AJR26526.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.473
AJR24134.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.459
AJR23543.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.435
AJR24116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.435
AJR25558.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.435
polA
DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.418
AJR24081.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.