AJR25748.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR25748.1

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (62 aa)

Predicted Functional Partners:

AJR24644.1

0.887

AJR25747.1

0.782

AJR23396.1

0.745

AJR25749.1

0.561

AJR25750.1

0.561

AJR25751.1

0.498

AJR25752.1

0.498

AJR26527.1

0.466

AJR24849.1

0.419

AJR22762.1

0.416

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22762.1	AJR24644.1	TZ53_02210	TZ53_13810	Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
AJR22762.1	AJR25748.1	TZ53_02210	TZ53_20365	Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
AJR23396.1	AJR24644.1	TZ53_06250	TZ53_13810	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR23396.1	AJR24849.1	TZ53_06250	TZ53_15055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.400
AJR23396.1	AJR25748.1	TZ53_06250	TZ53_20365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
AJR24644.1	AJR22762.1	TZ53_13810	TZ53_02210	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
AJR24644.1	AJR23396.1	TZ53_13810	TZ53_06250	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR24644.1	AJR24849.1	TZ53_13810	TZ53_15055	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.417
AJR24644.1	AJR25748.1	TZ53_13810	TZ53_20365	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
AJR24849.1	AJR23396.1	TZ53_15055	TZ53_06250	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
AJR24849.1	AJR24644.1	TZ53_15055	TZ53_13810	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AJR24849.1	AJR25748.1	TZ53_15055	TZ53_20365	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
AJR25747.1	AJR25748.1	TZ53_20360	TZ53_20365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25747.1	AJR25749.1	TZ53_20360	TZ53_20370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AJR25747.1	AJR25750.1	TZ53_20360	TZ53_20375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AJR25747.1	AJR25751.1	TZ53_20360	TZ53_20380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.498
AJR25747.1	AJR25752.1	TZ53_20360	TZ53_20385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
AJR25747.1	AJR26527.1	TZ53_20360	TZ53_20390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
AJR25748.1	AJR22762.1	TZ53_20365	TZ53_02210	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
AJR25748.1	AJR23396.1	TZ53_20365	TZ53_06250	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745