STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25750.1Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)    
Predicted Functional Partners:
AJR25749.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.995
AJR23755.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.832
tatC
MttB family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.800
AJR22575.1
Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.797
AJR25752.1
Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.787
AJR25751.1
FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.703
AJR26527.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
AJR25747.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
AJR25748.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
AJR25753.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.554
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.