AJR25750.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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textmining

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[Homology]

Score

AJR25750.1

Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)

Predicted Functional Partners:

AJR25749.1

0.997

AJR23755.1

0.843

AJR25752.1

0.790

tatC

0.787

AJR22575.1

0.782

AJR25751.1

0.700

AJR25900.1

0.678

AJR25973.1

0.678

AJR26527.1

0.631

AJR24699.1

0.623

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22575.1	AJR25750.1	TZ53_01005	TZ53_20375	Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR22575.1	tatC	TZ53_01005	TZ53_01000	Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MttB family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.	0.999
AJR23755.1	AJR25750.1	TZ53_08500	TZ53_20375	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AJR24699.1	AJR25750.1	TZ53_14155	TZ53_20375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
AJR24699.1	AJR25751.1	TZ53_14155	TZ53_20380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.570
AJR25749.1	AJR25750.1	TZ53_20370	TZ53_20375	Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AJR25749.1	AJR25751.1	TZ53_20370	TZ53_20380	Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.	FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.687
AJR25749.1	AJR25752.1	TZ53_20370	TZ53_20385	Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AJR25749.1	AJR26527.1	TZ53_20370	TZ53_20390	Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AJR25750.1	AJR22575.1	TZ53_20375	TZ53_01005	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25750.1	AJR23755.1	TZ53_20375	TZ53_08500	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AJR25750.1	AJR24699.1	TZ53_20375	TZ53_14155	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
AJR25750.1	AJR25749.1	TZ53_20375	TZ53_20370	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AJR25750.1	AJR25751.1	TZ53_20375	TZ53_20380	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.700
AJR25750.1	AJR25752.1	TZ53_20375	TZ53_20385	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
AJR25750.1	AJR25900.1	TZ53_20375	TZ53_21290	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
AJR25750.1	AJR25973.1	TZ53_20375	TZ53_21715	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
AJR25750.1	AJR26527.1	TZ53_20375	TZ53_20390	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AJR25750.1	tatC	TZ53_20375	TZ53_01000	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MttB family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.	0.787
AJR25751.1	AJR24699.1	TZ53_20380	TZ53_14155	FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570