STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25753.1Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AJR25754.1
Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
AJR24600.1
Copper metallochaperone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.755
AJR23593.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.698
AJR25752.1
Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.665
AJR25749.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.619
AJR25750.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.554
AJR23672.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.540
AJR25751.1
FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.526
AJR26527.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
AJR23404.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.