AJR25763.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR25763.1

Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)

Predicted Functional Partners:

AJR24699.1

0.942

AJR25762.1

0.938

AJR24768.1

0.913

AJR26219.1

0.905

AJR23620.1

0.905

AJR26562.1

0.898

AJR26531.1

0.880

AJR22802.1

0.839

AJR25972.1

0.837

AJR24509.1

0.830

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22802.1	AJR23620.1	TZ53_02470	TZ53_07720	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
AJR22802.1	AJR24699.1	TZ53_02470	TZ53_14155	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AJR22802.1	AJR24768.1	TZ53_02470	TZ53_14585	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AJR22802.1	AJR25763.1	TZ53_02470	TZ53_20460	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
AJR22802.1	AJR25972.1	TZ53_02470	TZ53_21710	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
AJR23620.1	AJR22802.1	TZ53_07720	TZ53_02470	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
AJR23620.1	AJR24509.1	TZ53_07720	TZ53_13030	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
AJR23620.1	AJR24699.1	TZ53_07720	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23620.1	AJR24768.1	TZ53_07720	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23620.1	AJR25763.1	TZ53_07720	TZ53_20460	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AJR23620.1	AJR25972.1	TZ53_07720	TZ53_21710	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
AJR23620.1	AJR26219.1	TZ53_07720	TZ53_06335	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJR23620.1	AJR26562.1	TZ53_07720	TZ53_21545	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
AJR24509.1	AJR23620.1	TZ53_13030	TZ53_07720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
AJR24509.1	AJR24699.1	TZ53_13030	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
AJR24509.1	AJR24768.1	TZ53_13030	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AJR24509.1	AJR25763.1	TZ53_13030	TZ53_20460	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AJR24509.1	AJR25972.1	TZ53_13030	TZ53_21710	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJR24509.1	AJR26219.1	TZ53_13030	TZ53_06335	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
AJR24509.1	AJR26531.1	TZ53_13030	TZ53_20470	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639