AJR26536.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

Cooccurrence

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[Homology]

Score

AJR26536.1

Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)

Predicted Functional Partners:

AJR26441.1

0.586

AJR25826.1

0.553

AJR22545.1

0.483

AJR23089.1

0.470

acpP

0.456

AJR22533.1

0.439

AJR24599.1

0.439

AJR25828.1

0.437

AJR25144.1

0.419

AJR22544.1

0.418

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22533.1	AJR26536.1	TZ53_00765	TZ53_20820	Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AJR22544.1	AJR22545.1	TZ53_00825	TZ53_00830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
AJR22544.1	AJR26536.1	TZ53_00825	TZ53_20820	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJR22545.1	AJR22544.1	TZ53_00830	TZ53_00825	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
AJR22545.1	AJR25144.1	TZ53_00830	TZ53_16830	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
AJR22545.1	AJR25828.1	TZ53_00830	TZ53_20835	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.575
AJR22545.1	AJR26441.1	TZ53_00830	TZ53_15855	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
AJR22545.1	AJR26536.1	TZ53_00830	TZ53_20820	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
AJR22545.1	acpP	TZ53_00830	TZ53_15870	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.900
AJR23089.1	AJR24599.1	TZ53_04215	TZ53_13565	OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vgr related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
AJR23089.1	AJR25144.1	TZ53_04215	TZ53_16830	OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AJR23089.1	AJR26536.1	TZ53_04215	TZ53_20820	OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.470
AJR24599.1	AJR23089.1	TZ53_13565	TZ53_04215	Vgr related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
AJR24599.1	AJR25144.1	TZ53_13565	TZ53_16830	Vgr related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
AJR24599.1	AJR26536.1	TZ53_13565	TZ53_20820	Vgr related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AJR25144.1	AJR22545.1	TZ53_16830	TZ53_00830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
AJR25144.1	AJR23089.1	TZ53_16830	TZ53_04215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AJR25144.1	AJR24599.1	TZ53_16830	TZ53_13565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Vgr related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
AJR25144.1	AJR25826.1	TZ53_16830	TZ53_20825	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AJR25144.1	AJR25828.1	TZ53_16830	TZ53_20835	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736