STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJR25866.1Peptidase U35; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AJR25868.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.963
AJR25865.1
Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.958
AJR25867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.909
AJR25870.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.883
AJR25861.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.837
AJR25857.1
Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.827
AJR25858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.813
AJR25855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.799
AJR25856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.744
AJR25864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.620
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.