trmB protein (Sphingobium sp. YBL2) - STRING interaction network

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[Homology]

Score

trmB

tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (231 aa)

Predicted Functional Partners:

serS

0.897

truB

0.879

AJR24903.1

0.795

AJR25629.1

0.783

AJR24897.1

0.746

AJR24058.1

0.732

AJR23149.1

0.713

AJR25492.1

0.713

AJR26044.1

0.713

rpmD

0.709

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23149.1	AJR24903.1	TZ53_04570	TZ53_15400	Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RluA family.	0.447
AJR23149.1	serS	TZ53_04570	TZ53_20875	Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).	0.562
AJR23149.1	trmB	TZ53_04570	TZ53_21175	Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.713
AJR23149.1	truB	TZ53_04570	TZ53_15955	Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.400
AJR24058.1	rpmD	TZ53_10325	TZ53_11390	SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
AJR24058.1	trmB	TZ53_10325	TZ53_21175	SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.732
AJR24058.1	truB	TZ53_10325	TZ53_15955	SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.619
AJR24897.1	trmB	TZ53_15365	TZ53_21175	Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.746
AJR24897.1	truB	TZ53_15365	TZ53_15955	Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.565
AJR24903.1	AJR23149.1	TZ53_15400	TZ53_04570	Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RluA family.	Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AJR24903.1	trmB	TZ53_15400	TZ53_21175	Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RluA family.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.795
AJR24903.1	truB	TZ53_15400	TZ53_15955	Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RluA family.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.640
AJR25492.1	trmB	TZ53_18890	TZ53_21175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.713
AJR25629.1	rpmD	TZ53_19700	TZ53_11390	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
AJR25629.1	trmB	TZ53_19700	TZ53_21175	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.783
AJR25629.1	truB	TZ53_19700	TZ53_15955	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.686
AJR26044.1	serS	TZ53_22155	TZ53_20875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).	0.562
AJR26044.1	trmB	TZ53_22155	TZ53_21175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.713
AJR26044.1	truB	TZ53_22155	TZ53_15955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.400
rpmD	AJR24058.1	TZ53_11390	TZ53_10325	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.931