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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25894.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)    
Predicted Functional Partners:
AJR25892.1
Stability determinant; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
AJR25893.1
Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
nhaA
pH-dependent sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
  
    0.523
AJR25082.1
Haloacid dehalogenase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.507
AJR25895.1
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.471
AJR26553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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