STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25930.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)    
Predicted Functional Partners:
AJR25931.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.896
AJR25932.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.798
AJR23991.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.773
AJR26016.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.770
AJR24603.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.769
AJR25929.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.757
AJR26129.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
AJR26559.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.633
AJR23437.1
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.620
AJR25171.1
Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.617
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.