Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJR25954.1Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
AJR22982.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
AJR25787.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.
  
 
 0.913
AJR25583.1
Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.908
AJR25685.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.
     
  0.900
AJR25953.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.885
AJR25952.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.871
AJR25951.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
AJR26563.1
L-iditol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.835
AJR25955.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.817
AJR24371.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.779
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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