AJR25961.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR25961.1

Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)

Predicted Functional Partners:

AJR23451.1

0.621

AJR26219.1

0.589

AJR25763.1

0.584

AJR24699.1

0.571

AJR22696.1

0.565

AJR25303.1

0.565

AJR26562.1

0.562

AJR25939.1

0.554

AJR25962.1

0.554

AJR25837.1

0.529

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22696.1	AJR25961.1	TZ53_01745	TZ53_21645	MIP family channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
AJR23451.1	AJR24699.1	TZ53_06640	TZ53_14155	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
AJR23451.1	AJR25961.1	TZ53_06640	TZ53_21645	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
AJR23451.1	AJR26219.1	TZ53_06640	TZ53_06335	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AJR23451.1	AJR26562.1	TZ53_06640	TZ53_21545	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AJR24699.1	AJR23451.1	TZ53_14155	TZ53_06640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
AJR24699.1	AJR25763.1	TZ53_14155	TZ53_20460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
AJR24699.1	AJR25961.1	TZ53_14155	TZ53_21645	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
AJR24699.1	AJR26219.1	TZ53_14155	TZ53_06335	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
AJR24699.1	AJR26562.1	TZ53_14155	TZ53_21545	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
AJR25303.1	AJR25961.1	TZ53_17800	TZ53_21645	MIP family channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
AJR25763.1	AJR24699.1	TZ53_20460	TZ53_14155	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
AJR25763.1	AJR25939.1	TZ53_20460	TZ53_21510	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AJR25763.1	AJR25961.1	TZ53_20460	TZ53_21645	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
AJR25763.1	AJR26219.1	TZ53_20460	TZ53_06335	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AJR25763.1	AJR26562.1	TZ53_20460	TZ53_21545	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
AJR25837.1	AJR25961.1	TZ53_20895	TZ53_21645	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
AJR25939.1	AJR25763.1	TZ53_21510	TZ53_20460	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AJR25939.1	AJR25961.1	TZ53_21510	TZ53_21645	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
AJR25939.1	AJR26562.1	TZ53_21510	TZ53_21545	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789