STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25981.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)    
Predicted Functional Partners:
AJR25982.1
Mn-containing catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
AJR25980.1
ZIP-family zinc transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
AJR25983.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
AJR23863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.508
AJR23401.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
AJR25969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.430
AJR25975.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.429
AJR25900.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.406
AJR25973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.406
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.