AJR26003.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR26003.1

Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)

Predicted Functional Partners:

AJR26002.1

0.998

AJR26000.1

0.969

AJR22463.1

0.953

AJR26001.1

0.880

AJR23144.1

0.858

AJR23959.1

0.767

AJR26178.1

0.764

AJR23522.1

0.764

AJR23981.1

0.764

AJR25815.1

0.759

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22463.1	AJR23144.1	TZ53_00305	TZ53_04545	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
AJR22463.1	AJR26000.1	TZ53_00305	TZ53_21925	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
AJR22463.1	AJR26002.1	TZ53_00305	TZ53_21935	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
AJR22463.1	AJR26003.1	TZ53_00305	TZ53_21940	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
AJR23144.1	AJR22463.1	TZ53_04545	TZ53_00305	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.	0.798
AJR23144.1	AJR26000.1	TZ53_04545	TZ53_21925	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
AJR23144.1	AJR26001.1	TZ53_04545	TZ53_21930	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nucleotide-binding protein; Displays ATPase and GTPase activities.	0.770
AJR23144.1	AJR26002.1	TZ53_04545	TZ53_21935	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.844
AJR23144.1	AJR26003.1	TZ53_04545	TZ53_21940	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858
AJR23522.1	AJR26003.1	TZ53_07055	TZ53_21940	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
AJR23959.1	AJR26003.1	TZ53_09720	TZ53_21940	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
AJR23981.1	AJR26003.1	TZ53_09870	TZ53_21940	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
AJR25815.1	AJR26003.1	TZ53_20755	TZ53_21940	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
AJR26000.1	AJR22463.1	TZ53_21925	TZ53_00305	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.	0.718
AJR26000.1	AJR23144.1	TZ53_21925	TZ53_04545	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
AJR26000.1	AJR26001.1	TZ53_21925	TZ53_21930	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nucleotide-binding protein; Displays ATPase and GTPase activities.	0.953
AJR26000.1	AJR26002.1	TZ53_21925	TZ53_21935	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
AJR26000.1	AJR26003.1	TZ53_21925	TZ53_21940	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR26001.1	AJR23144.1	TZ53_21930	TZ53_04545	Nucleotide-binding protein; Displays ATPase and GTPase activities.	PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
AJR26001.1	AJR26000.1	TZ53_21930	TZ53_21925	Nucleotide-binding protein; Displays ATPase and GTPase activities.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953