STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS44578.1Putative oxidoreductase. (164 aa)    
Predicted Functional Partners:
SIS44600.1
Hypothetical protein.
  
 0.981
SIS44588.1
Putative DNA-binding domain-containing protein.
 
  
 0.969
SIS44609.1
Predicted integral membrane protein.
 
  
 0.957
SIS69620.1
Hypothetical protein; Belongs to the UPF0276 family.
  
 0.765
SIS44619.1
Hypothetical protein.
 
    0.558
SIS69642.1
Hypothetical protein.
  
  
 0.466
SIS44630.1
Transcriptional regulator, AraC family.
 
     0.462
msrQ
Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]
  
  
 0.404
SIS56528.1
Hypothetical protein.
  
  
  0.401
SIT00896.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
  
  0.400
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.