STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS45093.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)    
Predicted Functional Partners:
SIS67770.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.931
SIT19383.1
Amino acid adenylation domain-containing protein.
 
 
 0.897
SIS92608.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
 0.743
SIS64843.1
Dehydrogenase/reductase SDR family member 13.
 
  
 0.728
SIS45104.1
Secreted Zn-dependent peptidases, insulinase-like; Belongs to the peptidase M16 family.
       0.655
SIS45114.1
Hypothetical protein.
       0.571
SIS74719.1
Flagellar protein FlaG.
    
   0.560
SIT20256.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  
 0.560
SIT19352.1
Phosphopantetheine attachment site.
  
 
 0.551
SIS95093.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.543
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.