Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS52442.1 | SIS52472.1 | SAMN05421686_102180 | SAMN05421686_102181 | Transcriptional regulator, MerR family. | Heavy-metal-associated domain-containing protein. | 0.828 |
SIS52442.1 | SIS52565.1 | SAMN05421686_102180 | SAMN05421686_102184 | Transcriptional regulator, MerR family. | Transposase. | 0.702 |
SIS52442.1 | lspA-2 | SAMN05421686_102180 | SAMN05421686_102182 | Transcriptional regulator, MerR family. | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.794 |
SIS52472.1 | SIS52442.1 | SAMN05421686_102181 | SAMN05421686_102180 | Heavy-metal-associated domain-containing protein. | Transcriptional regulator, MerR family. | 0.828 |
SIS52472.1 | SIS52565.1 | SAMN05421686_102181 | SAMN05421686_102184 | Heavy-metal-associated domain-containing protein. | Transposase. | 0.796 |
SIS52472.1 | SIS57196.1 | SAMN05421686_102181 | SAMN05421686_102348 | Heavy-metal-associated domain-containing protein. | Outer membrane protein, cobalt-zinc-cadmium efflux system. | 0.497 |
SIS52472.1 | lspA-2 | SAMN05421686_102181 | SAMN05421686_102182 | Heavy-metal-associated domain-containing protein. | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.930 |
SIS52565.1 | SIS52442.1 | SAMN05421686_102184 | SAMN05421686_102180 | Transposase. | Transcriptional regulator, MerR family. | 0.702 |
SIS52565.1 | SIS52472.1 | SAMN05421686_102184 | SAMN05421686_102181 | Transposase. | Heavy-metal-associated domain-containing protein. | 0.796 |
SIS52565.1 | lspA-2 | SAMN05421686_102184 | SAMN05421686_102182 | Transposase. | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.931 |
SIS57196.1 | SIS52472.1 | SAMN05421686_102348 | SAMN05421686_102181 | Outer membrane protein, cobalt-zinc-cadmium efflux system. | Heavy-metal-associated domain-containing protein. | 0.497 |
lspA-2 | SIS52442.1 | SAMN05421686_102182 | SAMN05421686_102180 | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | Transcriptional regulator, MerR family. | 0.794 |
lspA-2 | SIS52472.1 | SAMN05421686_102182 | SAMN05421686_102181 | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | Heavy-metal-associated domain-containing protein. | 0.930 |
lspA-2 | SIS52565.1 | SAMN05421686_102182 | SAMN05421686_102184 | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | Transposase. | 0.931 |