STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS77794.1Peptidyl-prolyl cis-trans isomerase C. (93 aa)    
Predicted Functional Partners:
SIT16484.1
Peptidyl-prolyl cis-trans isomerase D.
  
   
 0.724
SIS77811.1
Hypothetical protein.
 
     0.704
SIS77768.1
Protein of unknown function.
       0.549
SIS75555.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.533
SIS43827.1
Hypothetical protein.
    
 
 0.515
bamB
Beta-barrel assembly machine subunit BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.515
SIS65045.1
Hypothetical protein.
    
 
 0.515
SIS50992.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.509
SIS74255.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.509
SIS92428.1
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.494
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.