STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS83185.1Type IV pilus assembly protein PilC. (411 aa)    
Predicted Functional Partners:
SIS83167.1
Type IV pilus assembly protein PilB.
 
 0.982
SIS83202.1
Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.969
SIS49407.1
General secretion pathway protein E.
 
 0.952
SIT15390.1
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.951
SIT01385.1
MSHA biogenesis protein MshE.
 
 0.950
SIT17529.1
Type IV pilus assembly protein PilM.
 
 
 
 0.845
SIT17483.1
Type IV pilus assembly protein PilQ.
 
 
 
 0.827
SIS58547.1
Pilus retraction ATPase PilT.
   
 0.804
SIS58570.1
Twitching motility protein PilU.
 
   
 0.795
SIT17507.1
Type IV pilus assembly protein PilO.
 
 
 
 0.755
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.