STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT01273.1MSHA biogenesis protein MshJ. (221 aa)    
Predicted Functional Partners:
SIT01229.1
MSHA biogenesis protein MshI.
 
     0.954
SIT01317.1
MSHA biogenesis protein MshL.
 
  
 0.953
SIT15306.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.927
SIT01466.1
MSHA pilin protein MshA.
 
   
 0.887
SIT01337.1
MSHA biogenesis protein MshM.
 
     0.886
SIT01524.1
MSHA biogenesis protein MshO.
 
   
 0.872
SIT01507.1
MSHA pilin protein MshD.
 
   
 0.871
SIT01541.1
MSHA biogenesis protein MshP.
 
     0.863
SIT01562.1
MSHA biogenesis protein MshQ.
 
     0.827
SIT01583.1
MSHA biogenesis protein MshQ.
 
     0.827
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.