STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT01626.1PAS/PAC sensor signal transduction histidine kinase. (360 aa)    
Predicted Functional Partners:
ntrC
Nitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 0.995
SIS49243.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.989
SIS51230.1
Signal transduction histidine kinase.
 
 0.972
SIT00784.1
Two-component response regulator CbrB.
 0.946
SIS41525.1
Two-component response regulator PilR.
 0.937
SIT08545.1
PAS domain S-box-containing protein.
 
 
 0.930
SIS74573.1
Two-component system, response regulator FlrC.
 0.929
SIS74605.1
Sigma-54 specific transcriptional regulator, flagellar regulatory protein A.
 0.915
SIS74025.1
Two-component system, chemotaxis family, response regulator CheY.
 
 0.843
SIS45607.1
Na+/proline symporter.
  
 0.816
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.