STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT05316.1Protein phosphatase. (290 aa)    
Predicted Functional Partners:
SIT05648.1
Sulfatase-modifying factor enzyme 1.
 
 0.935
SIT05560.1
Type VI secretion system protein ImpM.
 
 0.908
SIS98930.1
Serine/threonine protein phosphatase PrpC.
 
 0.839
SIS66060.1
Protein phosphatase.
 
0.744
SIS99605.1
DKNYY family protein.
   
 0.743
SIT03852.1
PhoP regulatory network protein YrbL.
   
 0.743
SIT05574.1
Type VI secretion system protein ImpL.
 
 
 0.707
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.679
SIT05604.1
Type VI secretion system protein ImpJ.
 
 
 0.663
SIT05451.1
Type VI secretion system protein ImpH.
 
 
 0.661
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.