STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT04160.1Adenylate cyclase. (926 aa)    
Predicted Functional Partners:
cpdA
Icc protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
  
 0.906
SIS83781.1
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein.
  
  
 0.798
SIS44180.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.782
SIT05253.1
(p)ppGpp synthetase, RelA/SpoT family; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.782
SIT09220.1
Adenylate cyclase, class 3.
     
 0.740
SIS99898.1
Adenylate cyclase, class 3.
     
 0.714
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.653
SIT04175.1
Lipoprotein-attachment site-containing protein.
       0.625
SIT00928.1
Pentapeptide repeat-containing protein.
  
  
  0.615
SIT04216.1
Hypothetical protein.
 
     0.605
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.