STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT13973.1Uncharacterized domain 1-containing protein. (143 aa)    
Predicted Functional Partners:
SIT19383.1
Amino acid adenylation domain-containing protein.
  
 
 0.690
SIT13987.1
Nicotinamidase-related amidase.
       0.688
SIT13957.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.534
ilvE-2
Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.522
SIS90070.1
Putative NADPH-quinone reductase (modulator of drug activity B).
 
  
  0.467
SIS46082.1
Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
    
 0.419
SIS41791.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
  
  0.415
SIS51595.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
  
  0.401
SIS77355.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
  
  0.400
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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