STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT14046.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
SIT14032.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.773
SIT14077.1
Hypothetical protein.
       0.492
SIT14112.1
Type IV secretion system protein VirB2.
       0.492
SIT14128.1
Type IV secretion system protein VirB3.
       0.492
SIT14163.1
P-type conjugative transfer protein TrbJ.
       0.489
SIT14061.1
Type IV secretion system protein VirD4.
       0.477
SIT14092.1
Type IV secretion system protein VirB11.
       0.477
SIT14146.1
Type IV secretion system protein VirB4.
       0.475
SIT14179.1
Type IV secretion system protein TrbL.
       0.426
SIT14201.1
Type IV secretion system protein VirB5.
       0.417
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.