STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT14339.1ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein. (411 aa)    
Predicted Functional Partners:
SIT08545.1
PAS domain S-box-containing protein.
   
 0.821
SIS52694.1
PAS domain S-box-containing protein.
   
 0.748
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.738
SIS92732.1
Chorismate mutase.
    
 0.677
SIT19714.1
Hypothetical protein.
  
     0.663
SIT14355.1
OmpA family protein.
 
 
   0.585
SIS66571.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
 
  0.534
SIT03961.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
   
 0.517
SIS45607.1
Na+/proline symporter.
  
 0.512
SIS74307.1
Histidine kinase-like ATPase domain-containing protein.
 
 
  0.512
Your Current Organism:
Oleibacter marinus
NCBI taxonomy Id: 484498
Other names: BTCC B-675, DSM 24913, NBRC 105760, O. marinus, Oceanobacter sp. 1O14, Oceanobacter sp. 1O18, Oceanobacter sp. 2O1, Oleibacter marinus Teramoto et al. 2011, strain 2O1
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