Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS42515.1 | SIT17450.1 | SAMN05421686_101192 | SAMN05421686_11333 | Protein of unknown function. | DamX protein. | 0.674 |
SIS92025.1 | SIT17450.1 | SAMN05421686_106107 | SAMN05421686_11333 | Nucleoid-associated protein. | DamX protein. | 0.674 |
SIT17450.1 | SIS42515.1 | SAMN05421686_11333 | SAMN05421686_101192 | DamX protein. | Protein of unknown function. | 0.674 |
SIT17450.1 | SIS92025.1 | SAMN05421686_11333 | SAMN05421686_106107 | DamX protein. | Nucleoid-associated protein. | 0.674 |
SIT17450.1 | SIT17483.1 | SAMN05421686_11333 | SAMN05421686_11336 | DamX protein. | Type IV pilus assembly protein PilQ. | 0.793 |
SIT17450.1 | SIT17497.1 | SAMN05421686_11333 | SAMN05421686_11337 | DamX protein. | Type IV pilus assembly protein PilP. | 0.791 |
SIT17450.1 | SIT17507.1 | SAMN05421686_11333 | SAMN05421686_11338 | DamX protein. | Type IV pilus assembly protein PilO. | 0.791 |
SIT17450.1 | SIT17519.1 | SAMN05421686_11333 | SAMN05421686_11339 | DamX protein. | Type IV pilus assembly protein PilN. | 0.758 |
SIT17450.1 | SIT17529.1 | SAMN05421686_11333 | SAMN05421686_11340 | DamX protein. | Type IV pilus assembly protein PilM. | 0.758 |
SIT17450.1 | aroB | SAMN05421686_11333 | SAMN05421686_11334 | DamX protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.887 |
SIT17450.1 | aroK | SAMN05421686_11333 | SAMN05421686_11335 | DamX protein. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.795 |
SIT17450.1 | guaA | SAMN05421686_11333 | SAMN05421686_11115 | DamX protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.731 |
SIT17483.1 | SIT17450.1 | SAMN05421686_11336 | SAMN05421686_11333 | Type IV pilus assembly protein PilQ. | DamX protein. | 0.793 |
SIT17483.1 | SIT17497.1 | SAMN05421686_11336 | SAMN05421686_11337 | Type IV pilus assembly protein PilQ. | Type IV pilus assembly protein PilP. | 0.999 |
SIT17483.1 | SIT17507.1 | SAMN05421686_11336 | SAMN05421686_11338 | Type IV pilus assembly protein PilQ. | Type IV pilus assembly protein PilO. | 0.997 |
SIT17483.1 | SIT17519.1 | SAMN05421686_11336 | SAMN05421686_11339 | Type IV pilus assembly protein PilQ. | Type IV pilus assembly protein PilN. | 0.998 |
SIT17483.1 | SIT17529.1 | SAMN05421686_11336 | SAMN05421686_11340 | Type IV pilus assembly protein PilQ. | Type IV pilus assembly protein PilM. | 0.998 |
SIT17483.1 | aroB | SAMN05421686_11336 | SAMN05421686_11334 | Type IV pilus assembly protein PilQ. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.841 |
SIT17483.1 | aroK | SAMN05421686_11336 | SAMN05421686_11335 | Type IV pilus assembly protein PilQ. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.905 |
SIT17497.1 | SIT17450.1 | SAMN05421686_11337 | SAMN05421686_11333 | Type IV pilus assembly protein PilP. | DamX protein. | 0.791 |
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