STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIK1_2Phosphatidylinositol 4-kinase pik1alpha (PI4-kinase)(PtdIns-4-kinase). (320 aa)    
Predicted Functional Partners:
CU098_003885
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.803
ARF1
Arf GTPase arf1.
    
 0.803
CU098_004803
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.803
NCS1_1
Neuronal calcium sensor 1.
    
 
 0.797
NCS1_2
Neuronal calcium sensor 1.
    
 
 0.797
YPT3
Ras-protein ypt3.
    
 0.781
RAB11A_1
Ras-protein Rab-11A.
    
 0.781
RAB11A_2
Ras-protein Rab-11A.
    
 0.781
CU098_011670
Uncharacterized protein.
    
 0.781
CU098_000533
Uncharacterized protein.
    
 0.742
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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