STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002271Carn_acyltransf domain-containing protein. (285 aa)    
Predicted Functional Partners:
CU098_009135
Uncharacterized protein.
   
 0.812
CU098_006599
GP-PDE domain-containing protein.
   
 0.812
CU098_005363
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
 
 0.811
GDE1_2
Glycerophosphocholine phosphodiesterase.
     
 0.779
GDE1_1
Glycerophosphocholine phosphodiesterase.
     
 0.779
CU098_008099
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
  
0.777
CU098_007392
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
0.768
CAT2_2
Carnitine O-acetyltransferase mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
0.752
CU098_008395
Uncharacterized protein.
   
 0.751
CAT2_3
Carnitine O-acetyltransferase mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
0.745
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.