STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_006089Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
CRP79
Poly(A) binding protein Crp79.
    
  0.828
NEDD8
Nedd8-conjugating enzyme UBE2F.
   
 0.819
CU098_012679
Ubiquitin-like domain-containing protein.
   
 0.819
CU098_002904
RBR-type E3 ubiquitin transferase.
    
 0.797
DBL4
RBR-type E3 ubiquitin transferase.
    
 0.797
CU098_001414
RBR-type E3 ubiquitin transferase.
    
 0.797
ARIH2
RBR-type E3 ubiquitin transferase.
    
 0.797
RPS27A_1
Ribosomal 40S subunit protein S27A.
   
 0.703
RPS27A_2
Ribosomal 40S subunit protein S27A.
   
 0.703
UBI::CRP6_1
Ubiquitin-40S ribosomal protein S27a.
   
 0.703
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.