STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003736Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
CU098_007433
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.846
CU098_000990
Ribosomal_L2_C domain-containing protein.
    
 0.757
CRP79
Poly(A) binding protein Crp79.
    
  0.702
CDC6_1
AAA ATPase.
    
 0.681
CDC6_2
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.681
CU098_004432
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.675
CU098_003320
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.675
CU098_009343
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.675
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.675
NEDD8
Nedd8-conjugating enzyme UBE2F.
    
  0.638
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.