STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WC2_1Blue light receptor. (278 aa)    
Predicted Functional Partners:
WC1_3
Blue light receptor.
  
 
 
0.656
WC1_4
Blue light receptor.
  
 
 
0.654
CU098_001722
Uncharacterized protein.
   
 0.591
HIS2AV
Histone H2A; Belongs to the histone H2A family.
    
 0.584
CU098_006491
HPt domain-containing protein.
    
  0.566
CU098_003147
BTB domain-containing protein.
    
 0.554
CU098_002086
Uncharacterized protein.
    
 0.554
CU098_003353
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.512
HHT1_1
Histone H3; Belongs to the histone H3 family.
    
 0.500
HHT1_2
Histone H3.1.
    
 0.500
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.