STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFA4_3Palmitoyltransferase. (155 aa)    
Predicted Functional Partners:
RFWD3
RING finger and WD repeat domain-containing protein 3.
    
   0.520
CU098_004134
zf-GRF domain-containing protein.
    
 
 0.493
SMARCAL1
SWI/SNF-matrix-associated actin-dependent regulator of chromatin sub A-like protein 1.
    
 
 0.493
VAC8_1
Vacuolar protein 8.
    
 
 0.482
VAC8_2
Vacuolar protein 8.
    
 
 0.482
CSM3_1
Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
   0.444
TOF1_2
Topoisomerase 1-associated factor 1.
    
   0.444
CSM3_2
Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
   0.444
TOF1_1
Topoisomerase 1-associated factor 1.
    
   0.444
CU098_010431
3'-5' exonuclease domain-containing protein.
    
 
 0.434
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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