STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROM2_2RHO1 GDP-GTP exchange protein 2. (318 aa)    
Predicted Functional Partners:
ROM2_6
RHO1 GDP-GTP exchange protein 2.
 
     0.943
ROM2_4
RHO1 GDP-GTP exchange protein 2.
 
     0.941
ROM2_10
RHO1 GDP-GTP exchange protein 2.
 
 
 0.822
ROM2_12
RHO1 GDP-GTP exchange protein 2.
 
 
 0.808
CU098_012465
Uncharacterized protein.
 
 
 0.790
CU098_001366
Uncharacterized protein.
  
 
 0.785
RHO1_4
GTP-binding protein Rho1.
    
 0.703
RHO3
Rho GTPase.
    
 0.703
RHO1_5
GTP-binding protein Rho1.
    
 0.703
RHO1_3
GTP-binding protein Rho1.
    
 0.703
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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