CLB2_1 protein (Rhizopus stolonifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CLB2_1

G2/mitotic-specific cyclin; Belongs to the cyclin family. (428 aa)

Predicted Functional Partners:

CU098_010013

0.979

CU098_004257

0.977

CDC2

0.968

PHO85_1

0.959

PHO85_2

0.959

PHO85_3

0.959

CU098_002467

0.953

CU098_006558

0.953

CDC20_1

0.952

CDH1_1

0.952

Your Current Organism:

Rhizopus stolonifer

NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC2	CDC20_1	A0A367KSY5	A0A367IRD7	Cell division control protein 2.	Ubiquitin-protein transferase activating protein.	0.908
CDC2	CDH1_1	A0A367KSY5	A0A367K1M7	Cell division control protein 2.	Substrate-specific activator of APC-dependent proteolysis.	0.908
CDC2	CLB2_1	A0A367KSY5	A0A367IL38	Cell division control protein 2.	G2/mitotic-specific cyclin; Belongs to the cyclin family.	0.968
CDC2	CU098_002467	A0A367KSY5	A0A367ITL5	Cell division control protein 2.	Uncharacterized protein.	0.874
CDC2	CU098_004257	A0A367KSY5	A0A367IPM8	Cell division control protein 2.	DOC domain-containing protein.	0.844
CDC2	CU098_006558	A0A367KSY5	A0A367KWS1	Cell division control protein 2.	Uncharacterized protein.	0.874
CDC2	CU098_010013	A0A367KSY5	A0A367KTA8	Cell division control protein 2.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.987
CDC20_1	CDC2	A0A367IRD7	A0A367KSY5	Ubiquitin-protein transferase activating protein.	Cell division control protein 2.	0.908
CDC20_1	CLB2_1	A0A367IRD7	A0A367IL38	Ubiquitin-protein transferase activating protein.	G2/mitotic-specific cyclin; Belongs to the cyclin family.	0.952
CDC20_1	CU098_002467	A0A367IRD7	A0A367ITL5	Ubiquitin-protein transferase activating protein.	Uncharacterized protein.	0.684
CDC20_1	CU098_004257	A0A367IRD7	A0A367IPM8	Ubiquitin-protein transferase activating protein.	DOC domain-containing protein.	0.975
CDC20_1	CU098_006558	A0A367IRD7	A0A367KWS1	Ubiquitin-protein transferase activating protein.	Uncharacterized protein.	0.684
CDC20_1	CU098_010013	A0A367IRD7	A0A367KTA8	Ubiquitin-protein transferase activating protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.746
CDC20_1	PHO85_1	A0A367IRD7	A0A367IM45	Ubiquitin-protein transferase activating protein.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.908
CDC20_1	PHO85_2	A0A367IRD7	A0A367K7W8	Ubiquitin-protein transferase activating protein.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.908
CDC20_1	PHO85_3	A0A367IRD7	A0A367KK16	Ubiquitin-protein transferase activating protein.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.908
CDH1_1	CDC2	A0A367K1M7	A0A367KSY5	Substrate-specific activator of APC-dependent proteolysis.	Cell division control protein 2.	0.908
CDH1_1	CLB2_1	A0A367K1M7	A0A367IL38	Substrate-specific activator of APC-dependent proteolysis.	G2/mitotic-specific cyclin; Belongs to the cyclin family.	0.952
CDH1_1	CU098_002467	A0A367K1M7	A0A367ITL5	Substrate-specific activator of APC-dependent proteolysis.	Uncharacterized protein.	0.684
CDH1_1	CU098_004257	A0A367K1M7	A0A367IPM8	Substrate-specific activator of APC-dependent proteolysis.	DOC domain-containing protein.	0.975