STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_004086Uncharacterized protein. (341 aa)    
Predicted Functional Partners:
HADH2_1
Short-chain dehydrogenase reductase SDR.
    
 0.814
HADH2_2
Short-chain dehydrogenase reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.814
TRMT10A
tRNA methyltransferase 10.
   
 0.807
TRM10
tRNA (Guanine(9)-N(1))-methyltransferase.
   
 0.807
CU098_000584
Uncharacterized protein.
   
 
 0.751
CU098_009194
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
     
 0.744
RPL5
60S ribosomal protein L5.
     
 0.723
CU098_003147
BTB domain-containing protein.
   
  
 0.680
CU098_002086
Uncharacterized protein.
   
  
 0.680
POP4
Ribonuclease P protein subunit.
     
 0.679
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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