CU098_002461 protein (Rhizopus stolonifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CU098_002461

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (342 aa)

Predicted Functional Partners:

CU098_007338

0.843

PRMT5_1

0.843

PRMT5_2

0.843

CU098_010583

0.826

PSK1_1

0.809

CDC10

0.760

CU098_006748

0.712

CU098_007494

0.712

MPK1_1

0.702

CU098_005973

0.701

Your Current Organism:

Rhizopus stolonifer

NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC10	CU098_002461	A0A367JMN7	A0A367ILJ2	Cell division control protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.760
CDC10	CU098_006748	A0A367JMN7	A0A367IL51	Cell division control protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Rho-GAP domain-containing protein.	0.412
CDC10	CU098_007494	A0A367JMN7	A0A367JLS0	Cell division control protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Uncharacterized protein.	0.412
CU098_002461	CDC10	A0A367ILJ2	A0A367JMN7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cell division control protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.760
CU098_002461	CU098_005973	A0A367ILJ2	A0A367J1E9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.701
CU098_002461	CU098_006748	A0A367ILJ2	A0A367IL51	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Rho-GAP domain-containing protein.	0.712
CU098_002461	CU098_007338	A0A367ILJ2	A0A367JFD4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.843
CU098_002461	CU098_007494	A0A367ILJ2	A0A367JLS0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.712
CU098_002461	CU098_010583	A0A367ILJ2	A0A367JF25	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.826
CU098_002461	MPK1_1	A0A367ILJ2	A0A367IP01	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.702
CU098_002461	PRMT5_1	A0A367ILJ2	A0A367JFQ9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.843
CU098_002461	PRMT5_2	A0A367ILJ2	A0A367KPN1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.843
CU098_002461	PSK1_1	A0A367ILJ2	A0A367J6Y0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Serine/threonine protein kinase psk1.	0.809
CU098_005973	CU098_002461	A0A367J1E9	A0A367ILJ2	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.701
CU098_005973	CU098_006748	A0A367J1E9	A0A367IL51	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Rho-GAP domain-containing protein.	0.412
CU098_005973	CU098_007494	A0A367J1E9	A0A367JLS0	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Uncharacterized protein.	0.412
CU098_006748	CDC10	A0A367IL51	A0A367JMN7	Rho-GAP domain-containing protein.	Cell division control protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.412
CU098_006748	CU098_002461	A0A367IL51	A0A367ILJ2	Rho-GAP domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.712
CU098_006748	CU098_005973	A0A367IL51	A0A367J1E9	Rho-GAP domain-containing protein.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.412
CU098_006748	CU098_007494	A0A367IL51	A0A367JLS0	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.915