STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005661Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (313 aa)    
Predicted Functional Partners:
CU098_010580
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.861
CU098_013043
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.861
CU098_002444
Uncharacterized protein.
  
 0.846
CU098_005029
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.846
TPI1
Triosephosphate isomerase.
  
 0.840
TPIP1
Triosephosphate isomerase.
  
 0.840
PGK1_1
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.839
PGK1_2
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.839
CU098_011861
Uncharacterized protein.
  
 0.816
CU098_007495
Malate dehydrogenase.
  
 0.810
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.