STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPN1Proteasome regulatory particle base subunit. (441 aa)    
Predicted Functional Partners:
PUP2
Proteasome subunit alpha type.
   
 0.999
PSMD6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.999
RPN11
Multicatalytic endopeptidase.
   
 0.999
RPN8
Proteasome regulatory particle subunit.
   
 0.999
RPN9
26S proteasome regulatory subunit.
   
 0.999
RPN6_1
26S proteasome regulatory subunit rpn6.
   
 0.998
PSMD12_1
26S proteasome non-ATPase regulatory subunit 12.
   
 0.998
PSMC3
26S proteasome regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.998
CU098_004202
Uncharacterized protein.
   
 0.998
PSMD12_2
26S proteasome non-ATPase regulatory subunit 12.
   
 0.998
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.