STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISY1NineTeen Complex (NTC) component. (254 aa)    
Predicted Functional Partners:
BUD31
Component of the SF3b subcomplex of the U2 snRNP.
   
 0.993
RBM22
RNA binding motif protein 22.
   
 0.992
CU098_006668
WD_REPEATS_REGION domain-containing protein.
    
 0.988
CU098_002193
WD_REPEATS_REGION domain-containing protein.
    
 0.979
CRNKL1
Crooked neck-like protein 1.
   
 0.977
CLF1
NineTeen Complex (NTC) component.
   
 0.977
SYF1_1
Pre-mRNA-splicing factor syf1.
    
 0.975
SYF1_2
Pre-mRNA-splicing factor syf1.
    
 0.975
PRP45_2
mRNA splicing protein.
    
 0.973
PRP45_1
mRNA splicing protein.
    
 0.973
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.