STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003710Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
LACS7_1
Long chain acyl-CoA synthetase 7 peroxisomal.
     
 0.726
CU098_002024
AMP-binding domain-containing protein.
     
 0.726
CU098_009164
AMP-binding domain-containing protein.
     
 0.726
LACS7_2
Long chain acyl-CoA synthetase 7 peroxisomal.
     
 0.726
FAA4_3
Long-chain fatty acid-CoA ligase.
     
 0.710
FAA4_2
Long-chain fatty acid-CoA ligase.
     
 0.710
FAA4_7
Long-chain fatty acid-CoA ligase.
     
 0.710
FAA4_6
Long-chain fatty acid-CoA ligase.
     
 0.710
FAA4_5
Long-chain fatty acid-CoA ligase.
     
 0.710
CU098_005202
AB hydrolase-1 domain-containing protein.
  
 
 0.697
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.