STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000198Uncharacterized protein. (51 aa)    
Predicted Functional Partners:
OST3
Oligosaccharyl transferase subunit ost3/OST6.
    
 
 0.771
VPS26BL
Vacuolar protein sorting-associated protein 26B-like protein.
    
 
 0.762
CU098_005728
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
   0.699
ARO1_1
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
    
   0.697
ARO1_4
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
    
   0.697
SHO1_1
Transmembrane osmosensor.
    
   0.688
CU098_013640
Uncharacterized protein.
    
   0.688
CU098_001156
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 
  0.683
CU098_000649
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 
  0.683
CU098_005836
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 
  0.683
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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