STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_004516Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (395 aa)    
Predicted Functional Partners:
CU098_001156
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.600
CU098_000649
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.600
CU098_005836
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.600
CU098_011875
Uncharacterized protein.
    
 0.496
KEX1_1
Cell death protease.
   
 0.494
CU098_000198
Uncharacterized protein.
   
 0.494
CU098_010097
Uncharacterized protein.
   
 0.494
KEX1_2
Cell death protease; Belongs to the peptidase S10 family.
   
 0.494
CU098_010442
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.492
CU098_008529
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.492
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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