STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METAP1_2Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (356 aa)    
Predicted Functional Partners:
RPL35
60S ribosomal protein L35.
  
 
 0.928
RPL5
60S ribosomal protein L5.
  
 
 0.925
CU098_006322
Ribosomal_L30 domain-containing protein.
  
 
 0.860
RPL7
60S ribosomal protein L7.
  
 
 0.860
RPS3_1
40S ribosomal protein S3.
  
 
 0.845
RPS3_2
40S ribosomal protein S3.
  
 
 0.845
MAP2B
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.840
RPS5_1
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.818
RPS5_2
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.818
CU098_013795
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.802
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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