STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KGD1_12-oxoglutarate dehydrogenase E1 component. (525 aa)    
Predicted Functional Partners:
KGD2_2
2-oxoglutarate dehydrogenase complex E2 component.
 0.996
KGD2_3
2-oxoglutarate dehydrogenase complex E2 component.
 0.995
KGD2_1
2-oxoglutarate dehydrogenase complex E2 component.
 0.995
LPD1_1
Dihydrolipoyl dehydrogenase.
  
 0.987
LPD1_3
Dihydrolipoyl dehydrogenase.
  
 0.987
LPD1_2
Dihydrolipoyl dehydrogenase.
  
 0.987
SUCLA2
Beta' subunit.
  
 0.985
SUCLG1
Succinate-CoA ligase, alpha subunit.
  
 0.979
CU098_008127
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.979
LAT1
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.974
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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