STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_008046Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
COX17
Copper metallochaperone cox17.
   
 
 0.912
PTRH2
Peptidyl-tRNA hydrolase protein 2, mitochondrial.
   
 
 0.861
COX15_1
Protein required for the hydroxylation of heme O to form heme A, cox15.
     
 0.856
SCO1
Cu-binding protein.
   
 
 0.855
CU098_004775
COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.
   
 
 0.854
RSM22_2
37S ribosomal protein S22.
   
 
 0.847
COX15_2
Protein required for the hydroxylation of heme O to form heme A, cox15.
   
 
 0.831
CU098_004840
Uncharacterized protein.
   
 
 0.812
COX19
Cytochrome c oxidase assembly protein cox19.
   
 
 0.734
SHY1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
     
 0.698
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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