STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007577LIM zinc-binding domain-containing protein. (79 aa)    
Predicted Functional Partners:
MPH1_1
3'-5' DNA helicase.
     
  0.666
MPH1_2
3'-5' DNA helicase.
     
  0.666
CU098_010708
TauD domain-containing protein.
    
 
 0.552
ALG6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.552
CU098_003969
Copper-fist domain-containing protein.
    
  0.542
CU098_008008
Uncharacterized protein.
    
  0.542
CU098_003051
Cytochrome b561 domain-containing protein.
    
  0.542
CU098_000383
Uncharacterized protein.
    
  0.542
CU098_001790
Fungal_trans domain-containing protein.
    
  0.542
CU098_009643
Stc1 domain-containing protein.
    
  0.542
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.