STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003051Cytochrome b561 domain-containing protein. (378 aa)    
Predicted Functional Partners:
IPI3
Pre-rRNA-processing protein ipi3.
   
 0.864
CU098_007486
Uncharacterized protein.
   
 0.848
CU098_005646
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.768
PES1_1
mRNA-binding ribosome synthesis protein.
   
 0.765
PES1_2
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.765
CU098_004495
Uncharacterized protein.
   
 0.707
CU098_006132
Uncharacterized protein.
   
 0.707
ERB1_2
Ribosome bioproteinsis protein erb1.
   
  0.699
ERB1_1
Ribosome bioproteinsis protein erb1.
   
  0.699
LAS1
rRNA-processing protein las1.
    
  0.679
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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