STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DENND6AProtein dennd6a. (373 aa)    
Predicted Functional Partners:
CU098_011915
Mo-co_dimer domain-containing protein.
     
  0.822
MET14
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
     
  0.759
MET3_2
Sulfate adenylyltransferase.
     
  0.708
CU098_013005
Uncharacterized protein.
     
  0.708
MET3_1
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
     
  0.708
CU098_014014
Uncharacterized protein.
     
  0.708
CU098_011875
Uncharacterized protein.
   
 
  0.681
CU098_002883
Mo-co_dimer domain-containing protein.
     
  0.680
CU098_013530
Uncharacterized protein.
     
  0.596
VMA7
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.564
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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