STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005251Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
AP3S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 
  0.593
CU098_002472
Rho-GAP domain-containing protein.
     
  0.592
CU098_011834
DUF1681 domain-containing protein.
     
  0.590
CU098_013811
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
     
  0.590
VAS2_2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
  0.585
CU098_013327
Uncharacterized protein.
     
  0.577
APL4
AP-1 complex subunit gamma.
     
  0.568
TBC1D9
TBC1 domain member 9.
 
      0.557
AP1M1_2
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
     
 0.486
AP1M1_1
AP-1 complex subunit mu-1.
     
 0.486
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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